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EZRで医療統計+αでStanを使ってベイズ統計(一人) Advent Calendar 2017

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Rによる統計解析ソフトEZR(Easy R)を使って医療統計の勉強をします。

EZRは自治医科大学で開発されたRを解析エンジンとする無料のソフトウェアです。

テキストとして新谷歩先生の「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」と「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」を使います。
12+10=22日間でEZRを完全マスター!ということになっていますので、アドベントカレンダーにちょうどいいと思い、登録しました。

このテキストは、様々な統計手法を、数式やコードを使わず、実践に重きを置いて、医療統計のエッセンスを学習しやすいよう書かれています。
実際、EZRのGUI上ですべての手法を網羅しレポートの出力も自動で出来るので、生成したRスクリプトを見る必要はないです。

ただやっぱりエッセンスだけでなく、数式やコードを見ながらも学習していきたい。
このカレンダーでは、このテキストのトピックに従って、実際にEZRを使って生成されたRスクリプトを見て、どういった処理をしているのかを見ながら学習していきたいと思います。

また、EZRでは頻度主義の統計しか使われていませんが、ベイズ主義の統計も学習したいと思っています。
そこで、テキストで扱われる手法に、ベイズ統計学で対応するものがあればそれについても書いていきます。
これは、「ベイズ統計モデリング―R,JAGS,Stanによるチュートリアル― 原著第2版」(以下、犬4匹本)を参考にしていきたいと思います。

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If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

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Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」4日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」5日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」6日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」7日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」8日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」9日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」10日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」11日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」12日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」1日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」2日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」3日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」4日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」5日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」6日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」7日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」8日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」9日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」10日目

Overwrite

You can post either your article on Qiita or your blog post.

About reserved posting

If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

About posting period

Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

When you participate, we will assume that you have agreed to the terms of use

2627282930
  1. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  2. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  3. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  4. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  5. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  6. Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  7. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」4日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  8. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」5日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  9. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」6日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  10. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」7日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  11. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」8日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  12. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」9日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  13. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」10日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  14. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」11日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  15. 「みんなの医療統計 12日間で基礎理論とEZRを完全マスター!」12日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  16. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」1日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  17. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」2日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  18. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」3日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  19. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」4日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  20. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」5日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  21. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」6日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  22. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」7日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  23. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」8日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  24. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」9日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

  25. 「みんなの医療統計 多変量解析編 10日間で基礎理論とEZRを完全マスター!」10日目

    Overwrite

    You can post either your article on Qiita or your blog post.

    About reserved posting

    If you register a secret article by the day before the same day, it will be automatically published around 7:00 on the same day.

    About posting period

    Only articles submitted after November 1 of the year can be registered. (Secret articles can be registered anytime articles are posted.)

    When you participate, we will assume that you have agreed to the terms of use

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